HiCOMB 2023
22nd IEEE International Workshop on High Performance Computational Biology
In conjunction with the IEEE International Parallel and Distributed Processing Symposium (IPDPS'23)
St. Petersburg, Florida, USA
May 15, 2023
1:00 - 5:30 EDT
All HiCOMB Attendees: To attend HiCOMB, please register at the IPDPS registration page. HiCOMB program will be delivered through the IPDPS virtual platform. Details will be sent to all registered attendees.
Please see www.hicomb.org for most recent version of the program and the abstracts of keynote and invited speakers. All times below are in Eastern Daylight Time.
| Plenary Session (1:00 - 3:00) | |
|---|---|
| 1:00-1:05 | Opening Remarks Fahad Saeed, Program Co-chair |
| 1:05-2:05 | Keynote address by Valerie Scheider, National Library of Medicine, NIH All the Data! Opportunities and Challenges in Data Exploration and Analyses from Public Sequence Archives Q&A |
| 2:05-3:00 |
Invited Talk by Daniel Jacobson, Oak Ridge National Lab Q&A |
| 3:00-3:30 | Coffee Break |
| Regular paper presentations (3:30 – 5:30) | |
| 3:30-4:00 | Parallel Inference of Phylogenetic Stands with Gentrius Anastasis Togkousidis, Olga Chernomor, Alexandros Stamatakis |
| 4:00-4:30 | Designing Efficient SIMD Kernels for High Performance Sequence Alignment Doru Thom Popovici, Muaaz Gul Awan, Giulia Guidi, Rob Egan, Steven Hofmeyr, Leonid Oliker, Katherine Yelick |
| 4:30-5:00 | Using Hyperdimensional Computing to Extract Features for the Detection of Type 2 Diabetes Neftali Watkinson, Divya Devineni, Victor Joe, Tony Givargis, Alexandru Nicolau, Alexander Veidenbaum |
| 5:00-5:30 | An Efficient Parallel Sketch-based Algorithm for Mapping Long Reads to Contigs Tazin Rahman, Oieswarya Bhowmik, Ananth Kalyanaraman |
| 5:30-5:35 |
Closing Remarks |